PlantTFDB
Plant Transcription Factor Database
v4.0
Previous version: v3.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID KHN20440.1
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Phaseoleae; Glycine; Soja
Family bHLH
Protein Properties Length: 236aa    MW: 25864.4 Da    PI: 8.6969
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
KHN20440.1genomeTCUHKView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH31.92.4e-1079126454
                 HHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHH CS
         HLH   4 ahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksL 54 
                 ++  rE+ RRdr+N++f eL ++l +    +  K +K +iL  Av+ + +L
  KHN20440.1  79 SKACREKLRRDRLNDKFVELGSILEPG---RPAKTDKTAILIDAVRMVTQL 126
                 6789**********************8...89**************99988 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS5088812.30375126IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
SuperFamilySSF474592.36E-1277144IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
CDDcd000831.85E-678131No hitNo description
PfamPF000105.3E-879126IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene3DG3DSA:4.10.280.102.8E-1279148IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
SMARTSM003539.8E-881132IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0046983Molecular Functionprotein dimerization activity
Sequence ? help Back to Top
Protein Sequence    Length: 236 aa     Download sequence    Send to blast
MVSRENTNWL FDYGLIDDIP VPDATFGVNS SAFTWPPNAL DAPSNVGVDI DGSLGDSDGL  60
KESGSKKRVR SESCAASSSK ACREKLRRDR LNDKFVELGS ILEPGRPAKT DKTAILIDAV  120
RMVTQLRGEA QKLKDTNQGL QEKIKDLKAE KNELRDQKQR LKAEKEKLEQ QLKSLNGQPS  180
FMPPPAAIPA AFAVQGQAHG NKLVPFISYP GVAMWQFMPP AAVDTSQDHV LRPPVA
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankKT0311190.0KT031119.1 Glycine max clone HN_CCL_12 bHLH transcription factor (Glyma12g16560.1) mRNA, complete cds.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_003540036.11e-174PREDICTED: transcription factor ILR3
SwissprotQ9FH371e-109ILR3_ARATH; Transcription factor ILR3
TrEMBLA0A0B2QGT31e-174A0A0B2QGT3_GLYSO; Transcription factor ILR3
TrEMBLI1LSN41e-174I1LSN4_SOYBN; BHLH transcription factor
STRINGGLYMA12G16560.11e-174(Glycine max)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF16023486
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G54680.11e-66bHLH family protein
Publications ? help Back to Top
  1. Qi X, et al.
    Identification of a novel salt tolerance gene in wild soybean by whole-genome sequencing.
    Nat Commun, 2014. 5: p. 4340
    [PMID:25004933]